CDC-Authored Genomics Publications

Genomics|Update|Current

CDC-Authored Genomics Publications

CDC authors are indicated in bold

Molecular epidemiology of Pertussis Epidemic - Washington State, 2012.
Bowden KE, Williams MM, Cassiday PK, Milton A,Pawloski L, Harrison M, Martin SW, Meyer S, Qin X, DeBolt C, Tasslimi A, Syed N, Sorrell R, Tran M, Hiatt B,Tondella ML. J Clin Microbiol. 2014 Jul 16. pii: JCM.01189-14.

Cryptococcus gattii in North American Pacific Northwest: Whole-population genome analysis provides insights into species evolution and dispersal.
Engelthaler DM, Hicks ND, Gillece JD, ... Lockhart SR, Keim P, Meyer W. MBio. 2014 Jul 15;5(4). pii: e01464-14.

Genome sequences of nine bordetella holmesii strains isolated in the United States.
Harvill ET, Goodfield LL, Ivanov Y, Smallridge WE, Meyer JA, Cassiday PK, Tondella ML, Brinkac L, Sanka R, Kim M, Losada L. Genome Announc. 2014 Jun 19;2(3). pii: e00438-14.

Comparative genomic analysis and virulence differences in closely related Salmonella enterica serotype Heidelberg isolates from humans, retail meats, and animals
Hoffmann M, Zhao S, Pettengill J, Luo Y, Monday SR, Abbott J, Ayers SL, Cinar HN, Muruvanda T, Li C, Allard MW, Whichard J, Meng J, Brown EW, McDermott PF. Genome Biol Evol. 2014 May;6(5):1046-68.

Molecular determinants of influenza virus pathogenesis in mice.
Kamal RP1, Katz JM, York IA. Curr Top Microbiol Immunol. 2014 Jul 20.

Genetic diversity in Enterocytozoon bieneusi from dogs and cats in China: host specificity and public health implications 
Karim MR, Dong H, Yu F, Jian F, Zhang L, Wang R, Zhang S, Rume FI, Ning C, Xiao L. J Clin Microbiol. 2014 Jul 2.

Severity of rhinovirus infection in hospitalized adults is unrelated to genotype
McCulloch DJ, Sears MH, Jacob JT, Lyon GM, Burd EM, Caliendo AM, Hill CE, Nix WA, Oberste MS, Kraft CS.
Am J Clin Pathol. 2014 Aug;142(2):165-72. Genome Biol. 2014 Jun 27;15(6):R76

Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition.
Pop M, Walker AW, Paulson J, Lindsay B, Antonio M, Hossain M, Oundo J, Tamboura B, Mai V, Astrovskaya I, Bravo H, Rance R, Stares M, Levine MM, Panchalingam S, Kotloff K, Ikumapayi UN, Ebruke C, Adeyemi M, Ahmed D, Ahmed F, Alam M, Amin R, Siddiqui S, Ochieng JB, Ouma E, Juma J, Mailu E, Omore R, Morris J, Breiman RF, Saha D, Parkhill J, Nataro JP, Stine O.

Imputation and subset based association analysis across different cancer types identifies multiple independent risk loci in the TERT-CLPTM1L region on chromosome 5p15.33.
Wang Z, Zhu B, Zhang M,… Butler MA,… Shi J, Chatterjee N, Amundadottir LT. Hum Mol Genet. 2014 Jul 15. pii: ddu363.

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