Volume 35 Number 7 August 12-20, 2015
News/ Reviews/ Commentaries
FDA taps DNAnexus to build communal infrastructure for NGS test development![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Thomas UG. GenomeWeb, Aug 6, 2015.
Thomas UG. GenomeWeb, Aug 6, 2015.
Advancing precision medicine by enabling a collaborative informatics community![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Kas-Hout T, Litwack D. FDA Voice, Aug 5, 2015.
Kas-Hout T, Litwack D. FDA Voice, Aug 5, 2015.
Get with the program: DIY tips for adding coding to your analysis arsenal ![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Perkel JM. The Scientist, Aug 1, 2015.
Perkel JM. The Scientist, Aug 1, 2015.
NIH launches website for new genomic data sharing policy![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
GenomeWeb, Aug 10, 2015.
GenomeWeb, Aug 10, 2015.
CDC earmarks $2.3M for NGS, bioinformatic approaches to combat infectious disease![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
GenomeWeb, Aug 7, 2015.
GenomeWeb, Aug 7, 2015.
The tsetse fly and the test for genomics in Africa![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Krol A. Bio-IT World, Aug 6, 2015.
Krol A. Bio-IT World, Aug 6, 2015.
Plethora of respiratory viruses and respiratory virus data.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Storch GA et al. Clin. Infect. Dis. 2015 Aug 4.
Storch GA et al. Clin. Infect. Dis. 2015 Aug 4.
How next-generation sequencing and multiscale data analysis will transform infectious disease management.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Pak T et al. Clin. Infect. Dis. 2015 Aug 6.
Pak T et al. Clin. Infect. Dis. 2015 Aug 6.
Interdisciplinarity and infectious diseases: An Ebola case study.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Ezenwa VO et al. PLoS Pathog. 2015 Aug (8) e1004992
Ezenwa VO et al. PLoS Pathog. 2015 Aug (8) e1004992
Impact of space flight on bacterial virulence and antibiotic susceptibility.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Taylor PW et al. Infect Drug Resist 2015 249-62
Taylor PW et al. Infect Drug Resist 2015 249-62
The evolution and epidemiology of Listeria monocytogenes in Europe and the United States.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Lomonaco S et al. Infect. Genet. Evol. 2015 Aug 5.
Lomonaco S et al. Infect. Genet. Evol. 2015 Aug 5.
Methods/Tools
Informatics for RNA sequencing: A web resource for analysis on the cloud.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Griffith M et al. PLoS Comput. Biol. 2015 Aug (8) e1004393
Griffith M et al. PLoS Comput. Biol. 2015 Aug (8) e1004393
How current direct-acting antiviral and novel cell culture systems for HCV are shaping therapy and molecular diagnosis of chronic HCV infection.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Maggi F et al. Curr Drug Targets 2015 Aug 6.
Maggi F et al. Curr Drug Targets 2015 Aug 6.
Evolution/ Ecology/ Populations
The two-phase emergence of non pandemic HIV-1 group O in Cameroon.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Leoz M et al. PLoS Pathog. 2015 Aug (8) e1005029
Leoz M et al. PLoS Pathog. 2015 Aug (8) e1005029
Newly emerged porcine deltacoronavirus associated with diarrhoea in swine in China: Identification, prevalence and full-length genome sequence analysis.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Song D et al. Transbound Emerg Dis 2015 Aug 6.
Song D et al. Transbound Emerg Dis 2015 Aug 6.
Origin and evolution of Nipah virus.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Presti AL et al. J. Med. Virol. 2015 Aug 7.
Presti AL et al. J. Med. Virol. 2015 Aug 7.
Genotype-specific variation in West Nile virus dispersal in California.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Duggal NK et al. Virology 2015 Jul 23. 79-85 (CDC Author)
Duggal NK et al. Virology 2015 Jul 23. 79-85 (CDC Author)
The human gut microbiome as a transporter of antibiotic resistance genes between continents.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Bengtsson-Palme J et al. Antimicrob. Agents Chemother. 2015 Aug 10.
Bengtsson-Palme J et al. Antimicrob. Agents Chemother. 2015 Aug 10.
Pathogenicity / Antimicrobial Resistance
A molecular trigger for intercontinental epidemics of group A Streptococcus.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Zhu L et al. J. Clin. Invest. 2015 Aug 10.
Zhu L et al. J. Clin. Invest. 2015 Aug 10.
Adaptive evolution of malaria parasites in French Guiana: Reversal of chloroquine resistance by acquisition of a mutation in pfcrt![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Pelleau S, et al. PNAS, Aug 10, 2015.
Pelleau S, et al. PNAS, Aug 10, 2015.
Gag-protease sequence evolution following protease inhibitor monotherapy treatment failure in HIV-1 viruses circulating in East Africa.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Sutherland KA et al. AIDS Res. Hum. Retroviruses 2015 Aug 10.
Sutherland KA et al. AIDS Res. Hum. Retroviruses 2015 Aug 10.
Single genome analysis for the detection of linked multiclass drug resistance mutations in HIV-1-infected children after failure of protease inhibitor-based first-line therapy.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Lange CM et al. J. Acquir. Immune Defic. Syndr. 2015 Jun 1. (2) 138-44
Lange CM et al. J. Acquir. Immune Defic. Syndr. 2015 Jun 1. (2) 138-44
Complete genome sequence of enteroinvasive Escherichia coli O96:H19 associated with a severe foodborne outbreak.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Pettengill EA et al. Genome Announc 2015 (4)
Pettengill EA et al. Genome Announc 2015 (4)
Immunoproteomic profiling of Rickettsia parkeri and Rickettsia amblyommii.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Pornwiroon W et al. Ticks Tick Borne Dis 2015 Jul 22. (CDC Author)
Pornwiroon W et al. Ticks Tick Borne Dis 2015 Jul 22. (CDC Author)
Virology, immunology and pathology of human rabies during treatment.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Caicedo Y et al. Pediatr. Infect. Dis. J. 2015 May (5) 520-8 (CDC Author)
Caicedo Y et al. Pediatr. Infect. Dis. J. 2015 May (5) 520-8 (CDC Author)
Identification of mutations conferring streptomycin resistance in multidrug-resistant tuberculosis of China.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Zhao Li-Li et al. Diagn. Microbiol. Infect. Dis. 2015 Jul 2.
Zhao Li-Li et al. Diagn. Microbiol. Infect. Dis. 2015 Jul 2.
Fitness inference from short-read data: within-host evolution of a reassortant H5N1 influenza virus.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Illingworth CJR et al. Mol. Biol. Evol. 2015 Aug 4.
Illingworth CJR et al. Mol. Biol. Evol. 2015 Aug 4.
Detection/ Diagnosis
Development and validation of digital ELISAs for ultrasensitive detection and quantification of C. difficile toxins in stool.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Song L et al. J. Clin. Microbiol. 2015 Jul 22.
Song L et al. J. Clin. Microbiol. 2015 Jul 22.
Molecular detection and characterization of Mycoplasma pneumoniae among patients hospitalized with community-acquired pneumonia in the United States![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Diaz MH, et al. Open Forum Infect Dis, Jul 16, 2015. (CDC Author)
Diaz MH, et al. Open Forum Infect Dis, Jul 16, 2015. (CDC Author)
Development and evaluation of an enterovirus D68 real-time reverse transcriptase PCR assay.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Wylie TN et al. J. Clin. Microbiol. 2015 Aug (8) 2641-7
Wylie TN et al. J. Clin. Microbiol. 2015 Aug (8) 2641-7
Human toxoplasmosis: a comparative evaluation of the diagnostic potential of recombinant Toxoplasma gondii ROP5 and ROP18 antigens.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Grzybowski MM et al. J. Med. Microbiol. 2015 Aug 3.
Grzybowski MM et al. J. Med. Microbiol. 2015 Aug 3.
DNA-microarray-based genotyping of Clostridium difficile.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Gawlik D et al. BMC Microbiol. 2015 158
Gawlik D et al. BMC Microbiol. 2015 158
A lab-on-chip based platform for fast molecular diagnosis of multi-drug resistant tuberculosis.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Cabibbe AM et al. J. Clin. Microbiol. 2015 Aug 5.
Cabibbe AM et al. J. Clin. Microbiol. 2015 Aug 5.
High Resolution Melting-Typing (HRMT) of methicillin-resistant Staphylococcus aureus (MRSA): The new frontier to replace multi-locus sequence typing (MLST) for epidemiological surveillance studies.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Mongelli G0 et al. J. Microbiol. Methods 2015 Aug 5.
Mongelli G0 et al. J. Microbiol. Methods 2015 Aug 5.
Analysis of methicillin-resistant Staphylococcus aureus major clonal lineages by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS).![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Zhang T et al. J. Microbiol. Methods 2015 Aug 5. 122-127
Zhang T et al. J. Microbiol. Methods 2015 Aug 5. 122-127
Novel poxvirus infection in an immune suppressed patient.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Lakis NS et al. Clin. Infect. Dis. 2015 Aug 3. (CDC Author)
Lakis NS et al. Clin. Infect. Dis. 2015 Aug 3. (CDC Author)
Bartonella spp. and Coxiella burnetii associated with community-acquired, culture-negative endocarditis, Brazil.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Siciliano RF et al. Emerging Infect. Dis. 2015 Aug (8) 1429-32 (CDC Author)
Siciliano RF et al. Emerging Infect. Dis. 2015 Aug (8) 1429-32 (CDC Author)
Enhanced detection of type C botulinum neurotoxin by the Endopep-MS assay through optimization of peptide substrates.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Wang D et al. Bioorg. Med. Chem. 2015 Jul 1. (13) 3667-73 (CDC Author)
Wang D et al. Bioorg. Med. Chem. 2015 Jul 1. (13) 3667-73 (CDC Author)
Application of bioinformatics in probe design enables detection of enteroviruses on different taxonomic levels by advanced in situ hybridization technology.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Laiho JE et al. J. Clin. Virol. 2015 Aug 165-71 (CDC Author)
Laiho JE et al. J. Clin. Virol. 2015 Aug 165-71 (CDC Author)
Pyrosequencing for rapid detection of Mycobacterium tuberculosis second-line drugs and ethambutol resistance.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Lacoma A et al. Diagn. Microbiol. Infect. Dis. 2015 Jul 11.
Lacoma A et al. Diagn. Microbiol. Infect. Dis. 2015 Jul 11.
Detection of enteropathogens associated with travelers' diarrhea using a multiplex Luminex-based assay performed on stool samples smeared on Whatman FTA Elute cards.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Lalani T et al. Diagn. Microbiol. Infect. Dis. 2015 Sep (1) 18-20
Lalani T et al. Diagn. Microbiol. Infect. Dis. 2015 Sep (1) 18-20
Molecular detection of novel Anaplasmataceae closely related to Anaplasma platys and Ehrlichia canis in the dromedary camel (Camelus dromedarius).![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Bastos ADS et al. Vet. Microbiol. 2015 Sep 30. (3-4) 310-4
Bastos ADS et al. Vet. Microbiol. 2015 Sep 30. (3-4) 310-4
Epidemiology/ Outbreaks/ Transmission
Community surveillance of respiratory viruses among families in the Utah Better Identification of Germs-Longitudinal Viral Epidemiology (BIG-LoVE) study.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
Byington CL et al. Clin. Infect. Dis. 2015 Aug 4.
Byington CL et al. Clin. Infect. Dis. 2015 Aug 4.
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Antimicrobials/ Vaccines/ Interventions
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Host-Microbe Interactions
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Variants in the mannose-binding lectin gene MBL2 do not associate with sepsis susceptibility or survival in a large European cohort.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
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Multi-center comparison of lung and oral microbiomes of HIV-infected and HIV-uninfected individuals.![External Web Site Icon External Web Site Icon](https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_sTOQXSz98DkiVr599EHle6XoRFsNJKsms-6eK7JZXK2xMEh4thMlRSTLMSBlaucQCBeW87KGynLIASkyNRbuxjTv3aussFzSE6feLWtJAJ_GJDNzJ-NJ1W=s0-d)
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